BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB031E09SP1|AL429416
(601 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1578 557 e-159
>3x_Contig1578
Length = 13178
Score = 557 bits (274), Expect = e-159
Identities = 445/524 (84%)
Strand = Plus / Plus
Query: 1 attctattcttttcaattacccaaatataaggaagtgnccaatgggggaatcatcgcgat 60
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 6727 attctattcttttcaattacccaaatataaggaagtgtccaatgggggaatcatcgcgat 6786
Query: 61 gtcatgaagatgtgaatggtagattcggcactccaggatgtttctattcatttawastat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 6787 gtcatgaagatgtgaatggtagattcggcactccaggatgtttctattcattttttctat 6846
Query: 121 atkkvsggastgtgwgggtgtamgggtgtagtaaatkacccwtacaccctgngtannctc 180
|| ||| ||| ||||||| ||||||||||| | |||| ||||||||| ||| |||
Sbjct: 6847 atttccggactgtttgggtgtacgggtgtagtaatttacccttacaccctgtgtattctc 6906
Query: 181 agaattattmgtattatwagaaaatttcccttttcggattttcacatcccaactttttct 240
||||||||| ||||| | |||| |||||||||||||||||||||||||||||||||||||
Sbjct: 6907 agaattatttgtatttttagaatatttcccttttcggattttcacatcccaactttttct 6966
Query: 241 cttnttcttacagtttaacaaaaaatctactatccactntncggnctacgcangnnnnag 300
||| ||||||||||||||||||||||||||||||| || | ||| |||||| | ||
Sbjct: 6967 ctttttcttacagtttaacaaaaaatctactatcctcttttcggtctacgcttgttttag 7026
Query: 301 nggacagnggatcnnncanccacacagnnannncaaanckgcaaackagasgagttasaa 360
|||||| ||||| || || ||||| ||| | |||||| || ||||| ||
Sbjct: 7027 tggacagtggatctttcatcctcacagttttttcaattctgcaaacttgacgagtttcaa 7086
Query: 361 actcawttacaataccaaccagttttcatctttagcaagtgaatagaattkaaagattgt 420
||||| |||||||||||||||||||||||||||||||||||| ||||||| |||||||||
Sbjct: 7087 actcatttacaataccaaccagttttcatctttagcaagtgattagaatttaaagattgt 7146
Query: 421 ataggttgataactacgttttatagatgntcaaaancacacaaanaaacccaccagaaac 480
|||||||| |||||||||||||||| || ||| | ||| | | | |||| ||||||||
Sbjct: 7147 ataggttgttaactacgttttatagttgttcatattcactcttatataccctccagaaac 7206
Query: 481 caagcaaacacaaataaaccaaaattwattatacctaattcaca 524
|||| ||| | ||| ||| |||||| || ||||||||| ||||
Sbjct: 7207 caagtaaaaaaaaagaaatcaaaatgtatgatacctaatgcaca 7250
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.41 0.716 1.34
Gapped
Lambda K H
1.41 0.716 1.34
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3044
Number of Sequences: 1807
Number of extensions: 3044
Number of successful extensions: 69
Number of sequences better than 1.0e-20: 1
length of query: 601
length of database: 10,358,551
effective HSP length: 16
effective length of query: 585
effective length of database: 10,329,639
effective search space: 6042838815
effective search space used: 6042838815
T: 0
A: 40
X1: 5 (10.2 bits)
X2: 14 (28.5 bits)
S1: 12 (24.9 bits)
S2: 49 (100.1 bits)